دورية أكاديمية
Wastewater-based epidemiological investigation of SARS-CoV-2 in Porto Alegre, Southern Brazil
| العنوان: | Wastewater-based epidemiological investigation of SARS-CoV-2 in Porto Alegre, Southern Brazil |
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| المؤلفون: | Bruno Aschidamini Prandi, Arthur Tonietto Mangini, Waldemir Santiago Neto, André Jarenkow, Lina Violet-Lozano, Aline Alves Scarpellini Campos, Evandro Ricardo da Costa Colares, Paula Regina de Oliveira Buzzetto, Camila Bernardes Azambuja, Lisiane Correa de Barros Trombin, Margot de Souza Raugust, Rafaela Lorenzini, Alberto da Silva Larre, Caroline Rigotto, Fabrício Souza Campos, Ana Cláudia Franco |
| المصدر: | Science in One Health, Vol 1, Iss , Pp 100008- (2022) |
| بيانات النشر: | Elsevier, 2022. |
| سنة النشر: | 2022 |
| المجموعة: | LCC:Veterinary medicine LCC:Medicine |
| مصطلحات موضوعية: | SARS-CoV-2, Wastewater based epidemiology, Social restrictions, RT-qPCR, Ultracentrifugation, Veterinary medicine, SF600-1100, Medicine |
| الوصف: | Wastewater-based epidemiology (WBE) may be successfully used to comprehensively monitor and determine the scale and dynamics of some infections in the community. We monitored severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA in raw wastewater samples from Porto Alegre, Southern Brazil. The samples were collected and analyzed every week between May 2020 to May 2021. Meanwhile, different social restrictions were applied according to the number of hospitalized patients in the region. Weekly samples were obtained from two wastewater treatment plants (WWTP), named Navegantes and Serraria. To determine the SARS-CoV-2 RNA titers in wastewater, we performed RT-qPCR analysis targeting the N gene (N1). The highest titer of SARS-CoV-2 RNA was observed between epidemiological weeks (EWs) 33–37 (August), 42–43 (October), 45–46 (November), 49–51 (December) in 2020, and 1–3 (January), 7–13 (February to March) in 2021, with viral loads ranging from 1 × 106–3 × 106 genomic copies/Liter. An increase in positive confirmed cases followed such high viral loads. Depending on the sampling method used, positive cases increased in 6–7 days and 15 days after the rise of viral RNA titers in wastewater, with composite sampling methods showing a lower time lag and a higher resolution on the analyses. The results showed a direct relation between strict social restrictions and the loads of detected RNA reduction in wastewater, corroborating the number of confirmed cases. Differences in viral loads between different sampling points and methods were observed, as composite samples showed more stable results during the analyzed period. Besides, viral loads obtained from samples collected at Serraria WWTP were consistently higher than the ones obtained at Navegantes WWTP, indicating differences in local dynamics of SARS-CoV-2 spread in different regions of Porto Alegre. In conclusion, wastewater sampling to monitor SARS-CoV-2 is a robust tool to evaluate the viral loads contributing to hospitalized patients’ data and confirmed cases. In addition, SARS-CoV-2 detection in sewage may inform and alert the government when there are asymptomatic or non-tested patients. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 2949-7043 |
| Relation: | http://www.sciencedirect.com/science/article/pii/S2949704323000021; https://doaj.org/toc/2949-7043 |
| DOI: | 10.1016/j.soh.2023.100008 |
| URL الوصول: | https://doaj.org/article/706d8e634acd467d876454745292632a |
| رقم الأكسشن: | edsdoj.706d8e634acd467d876454745292632a |
| قاعدة البيانات: | Directory of Open Access Journals |
Full Text Finder | تدمد: | 29497043 |
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| DOI: | 10.1016/j.soh.2023.100008 |