دورية أكاديمية

GRAND: An Integrated Genome, Transcriptome Resources, and Gene Network Database for Gossypium

التفاصيل البيبلوغرافية
العنوان: GRAND: An Integrated Genome, Transcriptome Resources, and Gene Network Database for Gossypium
المؤلفون: Zhibin Zhang, Mao Chai, Zhaoen Yang, Zuoren Yang, Liqiang Fan
المصدر: Frontiers in Plant Science, Vol 13 (2022)
بيانات النشر: Frontiers Media S.A., 2022.
سنة النشر: 2022
المجموعة: LCC:Plant culture
مصطلحات موضوعية: Gossypium, genome, comparative genomics, variation, GRAND, Plant culture, SB1-1110
الوصف: With the increasing amount of cotton omics data, breeding scientists are confronted with the question of how to use massive cotton data to mine effective breeding information. Here, we construct a Gossypium Resource And Network Database (GRAND), which integrates 18 cotton genome sequences, genome annotations, two cotton genome variations information, and also four transcriptomes for Gossypium species. GRAND allows to explore and mine this data with the help of a toolbox that comprises a flexible search system, BLAST and BLAT suite, orthologous gene ID, networks of co-expressed genes, primer design, Gbrowse and Jbrowse, and drawing instruments. GRAND provides important information regarding Gossypium resources and hopefully can accelerate the progress of cultivating cotton varieties.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 1664-462X
Relation: https://www.frontiersin.org/articles/10.3389/fpls.2022.773107/full; https://doaj.org/toc/1664-462X
DOI: 10.3389/fpls.2022.773107
URL الوصول: https://doaj.org/article/74ec247ea5264165a53ee4f31fa6146f
رقم الأكسشن: edsdoj.74ec247ea5264165a53ee4f31fa6146f
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:1664462X
DOI:10.3389/fpls.2022.773107