دورية أكاديمية

The first chromosome-level genome of the stag beetle Dorcus hopei Saunders, 1854 (Coleoptera: Lucanidae)

التفاصيل البيبلوغرافية
العنوان: The first chromosome-level genome of the stag beetle Dorcus hopei Saunders, 1854 (Coleoptera: Lucanidae)
المؤلفون: Xiaolu Li, Chuyang Mao, Jinwu He, Xiaoyan Bin, Guichun Liu, Zhiwei Dong, Ruoping Zhao, Xia Wan, Xueyan Li
المصدر: Scientific Data, Vol 11, Iss 1, Pp 1-7 (2024)
بيانات النشر: Nature Portfolio, 2024.
سنة النشر: 2024
المجموعة: LCC:Science
مصطلحات موضوعية: Science
الوصف: Abstract Stag beetles (Coleoptera: Lucanidae) represent a significant saproxylic assemblage in forest ecosystems and are noted for their enlarged mandibles and male polymorphism. Despite their relevance as ideal models for the study of exaggerated mandibles that aid in attracting mates, the regulatory mechanisms associated with these traits remain understudied, and restricted by the lack of high-quality reference genomes for stag beetles. To address this limitation, we successfully assembled the first chromosome-level genome of a representative species Dorcus hopei. The genome was 496.58 Mb in length, with a scaffold N50 size of 54.61 Mb, BUSCO values of 99.8%, and 96.8% of scaffolds anchored to nine pairs of chromosomes. We identified 285.27 Mb (57.45%) of repeat sequences and annotated 11,231 protein-coding genes. This genome will be a valuable resource for further understanding the evolution and ecology of stag beetles, and provides a basis for studying the mechanisms of exaggerated mandibles through comparative analysis.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2052-4463
Relation: https://doaj.org/toc/2052-4463
DOI: 10.1038/s41597-024-03251-x
URL الوصول: https://doaj.org/article/8cde974b9a3548cfa81b2f1b585c27de
رقم الأكسشن: edsdoj.8cde974b9a3548cfa81b2f1b585c27de
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:20524463
DOI:10.1038/s41597-024-03251-x