دورية أكاديمية

Protocol for PPP1R15A-inhibited mouse model establishment with subcutaneous B16F1 tumor and single-cell analysis

التفاصيل البيبلوغرافية
العنوان: Protocol for PPP1R15A-inhibited mouse model establishment with subcutaneous B16F1 tumor and single-cell analysis
المؤلفون: Rongjing Wang, Minghui Wang, Siyu Pei, Yuchao Zhang, Shiwei Guo, Wei Guo, Zhenchuan Wu, Hailong Wang, Yizhe Li, Yufei Zhu, Ling-Hua Meng, Jingyu Lang, Gang Jin, Yichuan Xiao, Landian Hu, Xiangyin Kong
المصدر: STAR Protocols, Vol 4, Iss 4, Pp 102616- (2023)
بيانات النشر: Elsevier, 2023.
سنة النشر: 2023
المجموعة: LCC:Science (General)
مصطلحات موضوعية: Bioinformatics, Cancer, Immunology, Science (General), Q1-390
الوصف: Summary: Here, we present a protocol for exploring the effects of PPP1R15A inhibitor, Sephin1, on antitumor immunity of B16F1 subcutaneous tumor in mice. We describe steps for constructing single-cell transcriptome and TCR libraries, sequencing, and using sequencing data for the integration of expression and TCR data. We then detail procedures for gene differentiation, regulon and cell-cell communication analysis, and validation of single-cell analysis results.For complete details on the use and execution of this protocol, please refer to Wang et al.1 : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2666-1667
Relation: http://www.sciencedirect.com/science/article/pii/S266616672300583X; https://doaj.org/toc/2666-1667
DOI: 10.1016/j.xpro.2023.102616
URL الوصول: https://doaj.org/article/bd0396584b0744d5bc6a1400e4483272
رقم الأكسشن: edsdoj.bd0396584b0744d5bc6a1400e4483272
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:26661667
DOI:10.1016/j.xpro.2023.102616