دورية أكاديمية

ADAS-viewer: web-based application for integrative analysis of multi-omics data in Alzheimer’s disease

التفاصيل البيبلوغرافية
العنوان: ADAS-viewer: web-based application for integrative analysis of multi-omics data in Alzheimer’s disease
المؤلفون: Seonggyun Han, Jaehang Shin, Hyeim Jung, Jane Ryu, Habtamu Minassie, Kwangsik Nho, Insong Koh, Younghee Lee
المصدر: npj Systems Biology and Applications, Vol 7, Iss 1, Pp 1-10 (2021)
بيانات النشر: Nature Portfolio, 2021.
سنة النشر: 2021
المجموعة: LCC:Biology (General)
مصطلحات موضوعية: Biology (General), QH301-705.5
الوصف: Abstracts Alzheimer’s disease (AD) is a neurodegenerative disorder and is represented by complicated biological mechanisms and complexity of brain tissue. Our understanding of the complicated molecular architecture that contributes to AD progression benefits from performing comprehensive and systemic investigations with multi-layered molecular and biological data from different brain regions. Since recently different independent studies generated various omics data in different brain regions of AD patients, multi-omics data integration can be a useful resource for better comprehensive understanding of AD. Here we present a web platform, ADAS-viewer, that provides researchers with the ability to comprehensively investigate and visualize multi-omics data from multiple brain regions of AD patients. ADAS-viewer offers means to identify functional changes in transcript and exon expression (i.e., alternative splicing) along with associated genetic or epigenetic regulatory effects. Specifically, it integrates genomic, transcriptomic, methylation, and miRNA data collected from seven different brain regions (cerebellum, temporal cortex, dorsolateral prefrontal cortex, frontal pole, inferior frontal gyrus, parahippocampal gyrus, and superior temporal gyrus) across three independent cohort datasets. ADAS-viewer is particularly useful as a web-based application for analyzing and visualizing multi-omics data across multiple brain regions at both transcript and exon level, allowing the identification of candidate biomarkers of Alzheimer’s disease.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2056-7189
Relation: https://doaj.org/toc/2056-7189
DOI: 10.1038/s41540-021-00177-7
URL الوصول: https://doaj.org/article/bef16bdea32147e7a59a34a22677cf7a
رقم الأكسشن: edsdoj.bef16bdea32147e7a59a34a22677cf7a
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:20567189
DOI:10.1038/s41540-021-00177-7