دورية أكاديمية

RNA-Sequencing Analysis Revealed Genes Associated with Sweet Potato (Ipomoea batatas (L.) Lam.) Responses to Stem Rot during Different Infection Stages

التفاصيل البيبلوغرافية
العنوان: RNA-Sequencing Analysis Revealed Genes Associated with Sweet Potato (Ipomoea batatas (L.) Lam.) Responses to Stem Rot during Different Infection Stages
المؤلفون: Chen Li, Liang Zhang, Honghu Ji, Weihan Song, Ziyu Zhong, Meiqiao Jiang, Yungang Zhang, Qiang Li, Linrun Cheng, Meng Kou
المصدر: Genes, Vol 14, Iss 12, p 2215 (2023)
بيانات النشر: MDPI AG, 2023.
سنة النشر: 2023
المجموعة: LCC:Genetics
مصطلحات موضوعية: sweet potato, stem rot, transcriptome, gene, transcription factor, Genetics, QH426-470
الوصف: The sweet potato, which is an important tuber crop in China, is susceptible to a variety of pathogens and insect pests during cultivation and production. Stem rot is a common sweet potato disease that seriously affects tuber yield and quality. Unfortunately, there have been relatively few studies on the mechanism mediating the stem rot resistance of sweet potatoes. In this study, a transcriptome sequencing analysis was completed using Xushu 48 samples at different stages (T1, T2, and T3) of the stem rot infection. The T1 vs. T2, T1 vs. T3, and T2 vs. T3 comparisons detected 44,839, 81,436, and 61,932 differentially expressed genes (DEGs), respectively. The DEGs encoded proteins primarily involved in alanine, aspartate, and glutamate metabolism (ko00250), carbon fixation in photosynthetic organisms (ko00710), and amino sugar and nucleotide sugar metabolism (ko00520). Furthermore, some candidate genes induced by phytopathogen infections were identified, including gene-encoding receptor-like protein kinases (RLK5 and RLK7), an LRR receptor-like serine/threonine protein kinase (SERK1), and transcription factors (bHLH137, ERF9, MYB73, and NAC053). The results of this study provide genetic insights that are relevant to future explorations of sweet potato stem rot resistance, while also providing the theoretical basis for breeding sweet potato varieties that are resistant to stem rot and other diseases.
نوع الوثيقة: article
وصف الملف: electronic resource
اللغة: English
تدمد: 2073-4425
Relation: https://www.mdpi.com/2073-4425/14/12/2215; https://doaj.org/toc/2073-4425
DOI: 10.3390/genes14122215
URL الوصول: https://doaj.org/article/f5706f6c3ea74d80aa4da7cb6592da32
رقم الأكسشن: edsdoj.f5706f6c3ea74d80aa4da7cb6592da32
قاعدة البيانات: Directory of Open Access Journals
الوصف
تدمد:20734425
DOI:10.3390/genes14122215