دورية أكاديمية
Physical Map of the Short Arm of Bread Wheat Chromosome 3D
| العنوان: | Physical Map of the Short Arm of Bread Wheat Chromosome 3D |
|---|---|
| المؤلفون: | Kateřina Holušová, Jan Vrána, Jan Šafář, Hana Šimková, Barbora Balcárková, Zeev Frenkel, Benoit Darrier, Etienne Paux, Federica Cattonaro, Helene Berges, Thomas Letellier, Michael Alaux, Jaroslav Doležel, Jan Bartoš |
| المصدر: | The Plant Genome, Vol 10, Iss 2 (2017) |
| بيانات النشر: | Wiley, 2017. |
| سنة النشر: | 2017 |
| المجموعة: | LCC:Plant culture LCC:Genetics |
| مصطلحات موضوعية: | Plant culture, SB1-1110, Genetics, QH426-470 |
| الوصف: | Bread wheat ( L.) is one of the most important crops worldwide. Although a reference genome sequence would represent a valuable resource for wheat improvement through genomics-assisted breeding and gene cloning, its generation has long been hampered by its allohexaploidy, high repeat content, and large size. As a part of a project coordinated by the International Wheat Genome Sequencing Consortium (IWGSC), a physical map of the short arm of wheat chromosome 3D (3DS) was prepared to facilitate reference genome assembly and positional gene cloning. It comprises 869 contigs with a cumulative length of 274.5 Mbp and represents 85.5% of the estimated chromosome arm size. Eighty-six Mbp of survey sequences from chromosome arm 3DS were assigned in silico to physical map contigs via next-generation sequencing of bacterial artificial chromosome pools, thus providing a high-density framework for physical map ordering along the chromosome arm. About 60% of the physical map was anchored in this single experiment. Finally, 1393 high-confidence genes were anchored to the physical map. Comparisons of gene space of the chromosome arm 3DS with genomes of closely related species [ (L.) P.Beauv., rice ( L.), and sorghum [ (L.) Moench] and homeologous wheat chromosomes provided information about gene movement on the chromosome arm. |
| نوع الوثيقة: | article |
| وصف الملف: | electronic resource |
| اللغة: | English |
| تدمد: | 1940-3372 |
| Relation: | https://dl.sciencesocieties.org/publications/tpg/articles/10/2/plantgenome2017.03.0021; https://doaj.org/toc/1940-3372 |
| DOI: | 10.3835/plantgenome2017.03.0021 |
| URL الوصول: | https://doaj.org/article/fdd8cb34bcec4a9fa3416cbe358010e2 |
| رقم الأكسشن: | edsdoj.fdd8cb34bcec4a9fa3416cbe358010e2 |
| قاعدة البيانات: | Directory of Open Access Journals |
Full Text Finder | تدمد: | 19403372 |
|---|---|
| DOI: | 10.3835/plantgenome2017.03.0021 |